Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 7,530,820 | 100.00 |
DNA coding (bp) | 6,571,312 | 87.26 |
DNA G + C (bp) | 4,508,646 | 59.87 |
DNA scaffolds | 118 | Â |
Total genes | 7,526 | 100.00 |
Protein coding genes | 7,453 | 99.03 |
RNA genes | 73 | 0.97 |
Pseudo genes | 0 | 0 |
Genes in internal clusters | 538 | 7.15 |
Genes with function prediction | 5,902 | 78.42 |
Genes assigned to COGs | 5,148 | 68.40 |
Genes with Pfam domains | 6,174 | 82.04 |
Genes with signal peptides | 659 | 8.76 |
Genes with transmembrane helices | 1,699 | 22.58 |
CRISPR repeats | 0 | 0 |