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Table 1 Classification and general features of Clostridium ihumii strain AP5T according to the MIGS specification [18]

From: Non-contiguous finished genome sequence and description of Clostridium ihumii sp. nov.

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [19]

  

Phylum Firmicutes

TAS [2022]

  

Class Clostridia

TAS [23, 24]

  

Order Clostridiales

TAS [25, 26]

  

Family Clostridiaceae

TAS [25, 27]

  

Genus Clostridium

IDA [25, 28, 29]

  

Species Clostridium ihumii

IDA

  

Type strain AP5T

IDA

 

Gram stain

Positive

IDA

 

Cell shape

Rod-shapped

IDA

 

Motility

Motile

IDA

 

Sporulation

Sporulating

IDA

 

Temperature range

Mesophile

IDA

 

Optimum temperature

37 °C

IDA

 

pH range; Optimum

Not determined

 
 

Carbon source

Not determined

 

MIGS-6

Habitat

Human gut

IDA

MIGS-6.3

Salinity

Not determined

 

MIGS-22

Oxygen requirement

Anaerobic

IDA

MIGS-15

Biotic relationship

free living

IDA

MIGS-14

Pathogenicity

unknown

 

MIGS-4

Geographic location

France

IDA

MIGS-5

Sample collection time

January 2012

IDA

MIGS-4.1

Latitude

43.296482

IDA

MIGS-4.2

Longitude

5.36978

IDA

MIGS-4.3

Depth

Surface

IDA

MIGS-4.4

Altitude

0 m above sea level

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [30]