Table 4 Number of genes associated with general COG functional categories
From: Non-contiguous finished genome sequence and description of Clostridium ihumii sp. nov.
Code | Value | % of totala | Description |
|---|---|---|---|
J | 208 | 4.60 | Translation |
K | 292 | 6.50 | Transcription |
L | 181 | 4.02 | Replication, recombination and repair |
D | 31 | 0.69 | Cell cycle control, mitosis and meiosis |
V | 158 | 3.51 | Defense mechanisms |
T | 226 | 5.02 | Signal transduction mechanisms |
M | 154 | 3.42 | Cell wall/membrane biogenesis |
N | 92 | 2.04 | Cell motility |
U | 43 | 0.95 | Intracellular trafficking and secretion |
O | 86 | 1.91 | Posttranslational modification, protein turnover, chaperones |
C | 165 | 3.66 | Energy production and conversion |
G | 101 | 2.24 | Carbohydrate transport and metabolism |
E | 229 | 5.09 | Amino acid transport and metabolism |
F | 78 | 1.73 | Nucleotide transport and metabolism |
H | 119 | 2.64 | Coenzyme transport and metabolism |
I | 66 | 1.47 | Lipid transport and metabolism |
P | 163 | 3.62 | Inorganic ion transport and metabolism |
Q | 72 | 1.60 | Secondary metabolites biosynthesis, transport and catabolism |
R | 493 | 10.95 | General function prediction only |
S | 245 | 5.44 | Function unknown |
- | 1299 | 28.85 | Not in COGs |