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Table 1 Classification and general features of F. solisilvae 3-3T according to the MIGS recommendations [22]

From: High quality draft genomic sequence of Flavihumibacter solisilvae 3-3T

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [23]

Phylum Bacteroidetes

TAS [24, 25]

Class Sphingobacteriia

TAS [25, 26]

Order Sphingobacteriales

TAS [25, 27]

Family Chitinophagaceae

TAS [28]

Genus Flavihumibacter

TAS [1]

Species Flavihumibacter solisilvae

TAS [3]

Strain: 3-3T

TAS [3]

 

Gram stain

Positive

TAS [3]

 

Cell shape

Rod-shaped

TAS [3]

 

Motility

Non-motile

TAS [3]

 

Sporulation

Non-sporulating

NAS

 

Temperature range

20–37 °C

TAS [3]

 

Optimum temperature

28 °C

TAS [3]

 

pH range; Optimum

5.5–9.5; 7.5

TAS [3]

 

Carbon source

Sucrose, D-glucose, D-galactose, lactose, N-acetyl-glucosamine, L-arabinose, D-maltose, glycerol, dextrin, D-melibiose, glucuronamide, succinic acid mono-methyl ester, L-aspartic acid, D-galacturonic acid, D-glucosaminic acid, D-glucuronic acid, malonic acid, β-hydroxybutyric acid, 4-hydroxyphenlyacetic acid, quinic acid, D-saccharic acid, bromosuccinic acid, succinamic acid, L-pyroglutamic acid, urocanic acid,γ-aminobutyric acid, L-alanine, L-serine, D-alanine, L-histidine, L-alanyl-glycine, L-alaninamide and L-asparagine.

TAS [3]

GS-6

Habitat

Forest soil

TAS [3]

MIGS-6.3

Salinity

0–0.5 % NaCl (w/v)

TAS [3]

MIGS-22

Oxygen requirement

Aerobic

TAS [3]

MIGS-15

Biotic relationship

Free-living

NAS

MIGS-14

Pathogenicity

Non-pathogenic

NAS

MIGS-4

Geographic location

Bac Kan Province, Viet Nam

TAS [3]

MIGS-5

Sample collection

2012

TAS [3]

MIGS-4.1

Latitude

Not reported

 

MIGS-4.2

Longitude

Not reported

 

MIGS-4.4

Altitude

Not reported

 
  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [29]