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Table 1 Classification and general features of Acidiphilium sp. JA12-A1 [32]

From: Permanent draft genome sequence of Acidiphilium sp. JA12-A1

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [32]

  

Phylum Proteobacteria

TAS [3335]

  

Class Alphaproteobacteria

TAS [34, 36]

  

Order Rhodospirillales

TAS [37, 38]

  

Family Acetobacteraceae

TAS [39, 40]

  

Genus Acidiphilium

TAS [2, 41, 42]

  

Species Acidiphilium sp.

TAS [2]

  

Strain: JA12-A1

TAS [2]

 

Gram stain

Negative

NAS

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Not reported

 
 

Temperature range

Mesophile

NAS

 

Optimum temperature

30 °C

NAS

 

pH range; Optimum

Not reported

 
 

Carbon source

Heterotroph (galactose, glucose, tryptic soy broth, fructose, yeast extract)

NAS

MIGS-6

Habitat

Acid mine drainage

NAS

MIGS-6.3

Salinity

Not reported

 

MIGS-22

Oxygen requirement

Aerobic, anaerobic

NAS

MIGS-15

Biotic relationship

Free-living

NAS

MIGS-14

Pathogenicity

Non-pathogen

NAS

MIGS-4

Geographic location

Lignite mining site, Lusatia, Germany

NAS

MIGS-5

Sample collection

2011

NAS

MIGS-4.1

Latitude

51° 28' 10.38'' N

NAS

MIGS-4.2

Longitude

14° 28' 22.19'' E

NAS

MIGS-4.4

Altitude

125.45 m

NAS

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [43]