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Table 4 Genome statistics

From: Complete genome sequence of Novosphingobium pentaromativorans US6-1T

Attribute

Value

% of totala

Genome size (bp)

5,457,578

100.00

DNA coding (bp)

4,910,346

89.97

DNA G + C (bp)

3,439,297

63.02

DNA scaffolds

6

100.00

Total genes

5192

100.00

Protein coding genes

5110

98.42

RNA genes

82

1.58

Pseudo genes

59

1.14

Genes in internal clusters

4183

80.57

Genes with function prediction

4036

77.73

Genes assigned to COGs

3787

72.94

Genes with Pfam domains

4124

79.43

Genes with signal peptides

486

9.36

Genes with transmembrane helices

1073

20.67

CRISPR repeats

0

0

  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome