Table 4 Number of genes associated with the 25 general COG functional categories
Code | value | % agea | Description |
|---|---|---|---|
J | 175 | 4.16 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 175 | 4.16 | Transcription |
L | 120 | 2.85 | Replication, recombination and repair |
B | 6 | 0.14 | Chromatin structure and dynamics |
D | 25 | 0.59 | Cell cycle control, Cell division, chromosome partitioning |
V | 35 | 0.83 | Defense mechanisms |
T | 131 | 3.12 | Signal transduction mechanisms |
M | 118 | 2.81 | Cell wall/membrane biogenesis |
N | 16 | 0.38 | Cell motility |
U | 19 | 0.45 | Intracellular trafficking and secretion |
O | 131 | 3.12 | Posttranslational modification, protein turnover, chaperones |
C | 255 | 6.07 | Energy production and conversion |
G | 200 | 4.76 | Carbohydrate transport and metabolism |
E | 306 | 7.28 | Amino acid transport and metabolism |
F | 77 | 1.83 | Nucleotide transport and metabolism |
H | 159 | 3.78 | Coenzyme transport and metabolism |
I | 115 | 2.74 | Lipid transport and metabolism |
P | 215 | 5.11 | Inorganic ion transport and metabolism |
Q | 60 | 1.43 | Secondary metabolites biosynthesis, transport and catabolism |
R | 550 | 13.08 | General function prediction only |
S | 299 | 5.45 | Function unknown |
- | 1317 | 31.33 | Not in COGs |