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Table 6 Highlighted genes of Shimia str. SK013 present in other roseobacters

From: Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment

Highlighted gene products and locus tags

DMSP lyase

DddP

Shim_05930

DMSP

Demethylase

Shim_07490

DMSO reductase

Shim_34610

Trimethylamine methyltransferase

Shim_09600, 31260

Type IV pilus biogenesis

Shim_13020

AHL acylase

QuiP precursor

Shim_09300

Homoserine/homoserine lactone efflux protein

Shim_16180

N-AHLs

Shim_31370

Shimia haliotis

+

+

+

+

+

+

+

+

Shimia marina

 

+

+

+

+

+

+

 

Oceanicola nanhaiensis

+

  

+

  

+

+

Octadecabacter antarcticus

 

+

+

+

 

+

  

Octadecabacter arcticus

+

+

+

+

 

+

  

Roseobacter litoralis

+

+

+

+

 

+

+

+

Phaeobacter arcticus

 

+

+

+

+

+

+

 

Stappia stellulata

   

+

  

+

 

Leisingera nanhaiensis

+

+

+

 

+

+

  

Labrenzia aggregata

        

Loktanella cinnabarina

   

+

 

+

 

+

Sulfitobacter pontiacus

   

+

+

+

  

Sediminimonas qiaohouensis

 

+

 

+

 

+

+

+

Wenxinia marina

   

+

 

+

+