Table 4 Number of genes associated with general COG functional categories
From: Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium
Code | Value | %age | Description |
|---|---|---|---|
J | 136 | 3.02 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 269 | 5.97 | Transcription |
L | 114 | 2.53 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 34 | 0.75 | Cell cycle control, Cell division, chromosome partitioning |
V | 49 | 1.09 | Defense mechanisms |
T | 134 | 2.97 | Signal transduction mechanisms |
M | 170 | 3.77 | Cell wall/membrane biogenesis |
N | 54 | 1.19 | Cell motility |
U | 45 | 0.99 | Intracellular trafficking and secretion |
O | 96 | 2.13 | Posttranslational modification, protein turnover, chaperones |
C | 178 | 3.95 | Energy production and conversion |
G | 243 | 5.39 | Carbohydrate transport and metabolism |
E | 342 | 7.58 | Amino acid transport and metabolism |
F | 78 | 1.73 | Nucleotide transport and metabolism |
H | 123 | 2.73 | Coenzyme transport and metabolism |
I | 116 | 2.57 | Lipid transport and metabolism |
P | 208 | 4.61 | Inorganic ion transport and metabolism |
Q | 122 | 2.71 | Secondary metabolites biosynthesis, transport and catabolism |
R | 429 | 9.51 | General function prediction only |
S | 277 | 6.14 | Function unknown |
- | 1291 | 28.63 | Not in COGs |