Skip to main content

Table 3. Genome statistics

From: Draft genome sequence of Caminibacter mediatlanticus strain TB-2T, an epsilonproteobacterium isolated from a deep-sea hydrothermal vent

Attribute

Value

% of totala

Size (bp)

1,663,618

 

G+C content (bp)

451,320

27.13

Coding region (bp)

1,583,997

95.21

Total genesb

1,894

 

RNA genes

68

3.59

Protein-coding genes

1,826

96.41

Genes in paralog clusters

84

4.44

Genes assigned to COGs

1,461

77.14

Genes assigned in Pfam domain

1,371

72.39

Genes connected to KEGG pathways

630

33.26

Genes with signal peptides

214

11.30

Genes with transmembrane helices

400

21.12

Paralogous groups

38

2.01

  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.
  2. b) no pseudogenes found.