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Table 1. Classification and general features of Alistipes timonensis strain JC136T

From: Non-contiguous finished genome sequence and description of Alistipes timonensis sp. nov.

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [13]

 

Phylum Bacteroidetes

TAS [14,15]

 

Class Bacteroidia

TAS [14,16]

 

Order Bacteroidales

TAS [14,17]

 

Family Rikenellaceae

TAS [14,18]

 

Genus Alistipes

TAS [5,19]

 

Species Alistipes timonensis

IDA

 

Type strain JC136T

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Bacilli

IDA

 

Motility

Nonmotile

IDA

 

Sporulation

Nonsporulating

IDA

 

Temperature range

Mesophile

IDA

 

Optimum temperature

37°C

IDA

MIGS-6.3

Salinity

Growth in BHI medium + 1% NaCl

IDA

MIGS-22

Oxygen requirement

Anaerobic

IDA

 

Carbon source

Unknown

NAS

 

Energy source

Unknown

NAS

MIGS-6

Habitat

Human gut

IDA

MIGS-15

Biotic relationship

Free living

IDA

 

Pathogenicity

Unknown

 
 

Biosafety level

2

 

MIGS-14

Isolation

Human feces

NAS

MIGS-4

Geographic location

Senegal

IDA

MIGS-5

Sample collection time

September 2010

IDA

MIGS-4.1

Latitude

13.7167

IDA

MIGS-4.1

Longitude

16.4167

IDA

MIGS-4.3

Depth

Surface

IDA

MIGS-4.4

Altitude

51 m above sea level

IDA

  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [20]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.