Table 3. Genome statistics
From: Complete genome sequence of Serratia plymuthica strain AS12
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 5,443,009 | 100.00% |
DNA Coding region (bp) | 4,772,809 | 87.69% |
DNA G+C content (bp) | 3,045,986 | 55.96% |
Total genesb | 5,139 | 100.00% |
RNA genes | 112 | 2.18% |
rRNA operons | 7 | 0.14% |
Protein-coding genes | 4,952 | 96.36% |
Pseudo genes | 75 | 1.46% |
Genes in paralog clusters | 2721 | 52.95% |
Genes assigned to COGs | 3,808 | 74.10% |
Genes assigned in Pfam domains | 4,184 | 81.41% |
Genes with signal peptides | 675 | 13.13% |
Genes with transmembrane helices | 1,228 | 23.89% |
CRISPR repeats | 1 |