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Table 1. Classification and general features of S. agalactiae SA20-06 according to the MIGS recommendations [15].

From: Complete genome sequence of Streptococcus agalactiae strain SA20-06, a fish pathogen associated to meningoencephalitis outbreaks

MIGS ID

Property

Term

Evidence code

  

Domain Bacteria

TAS [16]

  

Phylum Firmicutes

TAS [1719]

  

Class Bacilli

TAS [20,21]

  

Order Lactobacillales

TAS [20,22]

  

Family Streptococcaceae

TAS [23,24]

 

Classification

Genus Streptococcus

TAS [23,25,26]

  

Species Streptococcus agalactiae

TAS [23,2729]

  

Strain SA20-06

TAS [4]

 

Gram stain

Positive

TAS [30]

 

Cell shape

Spherical or ovoid

TAS [30]

 

Motility

non-motile

TAS [30]

 

Sporulation

non-sporulating

TAS [30]

 

Temperature range

mesophile

TAS [30]

 

Optimum temperature

28°C (fish isolates)

IDA

 

Salinity

usually grows in 4% of NaCl, but not in 6.5%

TAS [30]

MIGS-22

Oxygen

Facultative anaerobe

TAS [30]

 

Carbon source

cellobioise, beta-glucoside, trehalose, mannose, lactose, fructose, mannitol, N-acetylgalactosamine, and glucose

TAS [31]

 

Energy source

Chemoorganotroph with fermentative metabolism

TAS [30]

MIGS-6

Habitat

Host

TAS [4]

MIGS-15

Biotic relationship

Symbiotic (pathogen)

TAS [4]

MIGS-14

Pathogenicity

Cows, human, fishes and other animals

TAS [12,14]

 

Biosafety level

2

TAS [32]

 

Isolation

Kidney of Nile tilapia

TAS [4]

MIGS-4

Geographic location

Parana state, Brazil

TAS [4]

MIGS-5

Sample collection time

2006

TAS [4]

MIGS-4.1

Latitude

not reported

 

MIGS-4.2

Longitude

not reported

 

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [33]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.