Table 4. Assignment of AbM4 protein coding genes to COG functional categories

J

144

8.62

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

72

4.31

Transcription

L

84

5.03

Replication, recombination and repair

B

3

0.18

Chromatin structure and dynamics

D

6

0.36

Cell cycle control, cell division, chromosome partitioning

Y

-

-

Nuclear structure

V

23

1.38

Defense mechanisms

T

9

0.54

Signal transduction mechanisms

M

59

3.53

Cell wall/membrane/envelope biogenesis

N

4

0.24

Cell motility

Z

-

-

Cytoskeleton

W

-

-

Extracellular structures

U

11

0.66

Intracellular trafficking, secretion, and vesicular transport

O

38

2.27

Posttranslational modification, protein turnover, chaperones

C

140

8.38

Energy production and conversion

G

38

2.27

Carbohydrate transport and metabolism

E

117

7.00

Amino acid transport and metabolism

F

46

2.75

Nucleotide transport and metabolism

H

82

4.91

Coenzyme transport and metabolism

I

17

1.02

Lipid transport and metabolism

P

58

3.47

Inorganic ion transport and metabolism

Q

9

0.54

Secondary metabolites biosynthesis, transport and catabolism

R

184

11.01

General function prediction only

S

114

6.82

Function unknown

Not defined

413

24.72

No COG category assigned