Attribute | Value | % of totala |
---|---|---|
Genome size (bp) | 4,856,302 | 100.00 |
DNA GC content (bp) | 1,821,262 | 37.50 |
DNA coding region (bp) | 3,924,297 | 80.81 |
Number of replicons | 1 | |
Extrachromosomal | 0 | |
Total genes | 4,938 | 100 |
RNA genes | 46 | 0.93 |
rRNA operons | 7 | |
tRNA genes | 38 | 0.77 |
Pseudogenes | 1,623 | 32.87 |
Protein-coding genes | 4,846 | 98.14 |
Genes in paralog clusters | 658 | 13.33 |
Genes assigned to COGs | 2,946 | 59.66 |
1 or more conserved domains | 2,946 | 59.66 |
2 or more conserved domains | 529 | 10.71 |
3 or more conserved domains | 98 | 1.98 |
Genes with function prediction | 3,315 | 67.13 |
Genes assigned Pfam domains | 2,799 | 56.68 |
Genes with signal peptides | 1,206 | 24.42 |
Genes with transmembrane helices | 1,206 | 24.42 |
CRISPR repeats | 0 | 0.00 |