Table 4. Number of genes associated with the general COG functional categories

J

179

4.67

Translation, ribosomal structure and biogenesis

A

0

0.00

RNA processing and modification

K

322

8.39

Transcription

L

232

6.05

Replication, recombination and repair

B

3

0.08

Chromatin structure and dynamics

D

34

0.89

Cell cycle control, cell division, chromosome partitioning

Y

0

0.00

Nuclear structure

V

40

1.04

Defense mechanisms

T

161

4.2

Signal transduction mechanisms

M

181

4.72

Cell wall/membrane/envelope biogenesis

N

51

1.33

Cell motility

Z

1

0.03

Cytoskeleton

W

0

0.00

Extracellular structures

U

62

1.62

Intracellular trafficking, secretion, and vesicular transport

O

138

3.60

Posttranslational modification, protein turnover, chaperones

C

237

6.18

Energy production and conversion

G

154

4.01

Carbohydrate transport and metabolism

E

459

11.96

Amino acid transport and metabolism

F

102

2.66

Nucleotide transport and metabolism

H

184

4.8

Coenzyme transport and metabolism

I

150

3.91

Lipid transport and metabolism

P

182

4.74

Inorganic ion transport and metabolism

Q

123

3.21

Secondary metabolites biosynthesis, transport and catabolism

R

465

12.12

General function prediction only

S

377

9.83

Function unknown

-

1,110

24.09

Not in COGs