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Table 1 Classification and the general features of Pseudomonas fluorescens PICF7 according to the MIGS recommendations [ [14]]

From: Complete genome sequence of Pseudomonas fluorescens strain PICF7, an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae

MIGS ID

Property

Term

Evidence code a

  

Domain Bacteria

TAS [15]

  

Phylum Proteobacteria

TAS [16]

  

Class Gammaproteobacteria

TAS [17, 18]

 

Classification

Order Pseudomonadales

TAS [19, 20]

  

Family Pseudomonadaceae

TAS [21, 22]

  

Genus Pseudomonas

TAS [2125]

  

Species Pseudomonas fluorescens

TAS [26, 27]

  

Strain PICF7

TAS [1, 5]

 

Gram stain

Negative

TAS [26]

 

Cell shape

Rod-shaped

TAS [26]

 

Motility

Motile

TAS [26]

 

Sporulation

None

NAS

 

Temperature range

Mesophilic

IDA

 

Optimum temperature

28°C

IDA

MIGS-22

Oxygen

Aerobic

IDA, TAS [26]

 

Carbon source

Heterotrophic

IDA, TAS [26]

 

Energy metabolism

Chemoorganotrophic

NAS

MIGS-6

Habitat

Soil, olive root-associated

TAS [1, 5]

MIGS-6.3

Salinity

NaCl 1-4%

IDA

MIGS-10

Extrachromosomal elements

None

IDA

MIGS-11

Estimated size

6.14 Mb

IDA

MIGS-15

Biotic relationship

Rhizospheric, root endophytic

TAS [1, 3, 5, 6]

MIGS-14

Pathogenicity

Non-pathogenic

TAS [1, 3, 5]

 

Host

Olea europaea

TAS [1]

 

Host taxa ID

4146

 
 

Isolation source

Root

TAS [1]

 

Biosafety level

1

NAS

MIGS-4

Geographic location

Córdoba, Spain

TAS [1]

MIGS-5

Sample collection time

1998

TAS [1]

MIGS-4.1

Latitude

37°41′28″N

NAS

MIGS-4.2

Longitude

4°28′58″W

NAS

MIGS-4.4

Altitude

230 m.a.s.l

NAS

  1. aEvidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (a direct report exists in the literature); NAS: Non-traceable Author Statement (not directly observed for the living, isolated sample, but based on a generally accepted property of the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [28].