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  1. Short genome report

    Draft genome sequence of the cellulolytic endophyte Chitinophaga costaii A37T2T

    Here we report the draft genome sequence of Chitinophaga costai A37T2T (=CIP 110584T, =LMG 27458T), which was isolated from the endophytic community of Pinus pinaster tree. The total genome size of C. costaii A37...

    Diogo N. Proença, William B. Whitman, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides and Paula V. Morais

    Standards in Genomic Sciences 2017 12:53

    Published on: 6 September 2017

  2. Short genome report

    Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis

    Arthrobacter alpinus R3.8 is a psychrotolerant bacterial strain isolated from a soil sample obtained at Rothera Point, Adelaide Island, close to the Antarctic Peninsula. Strain R3.8 was s...

    Wah-Seng See-Too, Robson Ee, Yan-Lue Lim, Peter Convey, David A. Pearce, Taznim Begam Mohd Mohidin, Wai-Fong Yin and Kok Gan Chan

    Standards in Genomic Sciences 2017 12:52

    Published on: 6 September 2017

  3. Short genome report

    Complete genome sequence of the sulfur-oxidizing chemolithoautotrophic Sulfurovum lithotrophicum 42BKTT

    A sulfur-oxidizing chemolithoautotrophic bacterium, Sulfurovum lithotrophicum 42BKTT, isolated from hydrothermal sediments in Okinawa, Japan, has been used industrially for CO2 bio-mitigation owing to its ability...

    Wooyoung Jeon, Lia Priscilla, Gyuyeon Park, Heeseok Lee, Narae Lee, Dongyup Lee, Hyuksung Kwon, Iksung Ahn, Changha Lee, Hongweon Lee and Jungoh Ahn

    Standards in Genomic Sciences 2017 12:54

    Published on: 6 September 2017

  4. Extended genome report

    Permanent draft genome sequence of Frankia sp. NRRL B-16219 reveals the presence of canonical nod genes, which are highly homologous to those detected in Candidatus Frankia Dg1 genome

    Frankia sp. NRRL B-16219 was directly isolated from a soil sample obtained from the rhizosphere of Ceanothus jepsonii growing in the USA. Its host plant range includes members of Elaeagna...

    Amir Ktari, Imen Nouioui, Teal Furnholm, Erik Swanson, Faten Ghodhbane-Gtari, Louis S. Tisa and Maher Gtari

    Standards in Genomic Sciences 2017 12:51

    Published on: 4 September 2017

  5. Extended genome report

    Genome sequence of the sulfur-oxidizing Bathymodiolus thermophilus gill endosymbiont

    Bathymodiolus thermophilus, a mytilid mussel inhabiting the deep-sea hydrothermal vents of the East Pacific Rise, lives in symbiosis with chemosynthetic Gammaproteobacteria within its gil...

    Ruby Ponnudurai, Lizbeth Sayavedra, Manuel Kleiner, Stefan E. Heiden, Andrea Thürmer, Horst Felbeck, Rabea Schlüter, Stefan M. Sievert, Rolf Daniel, Thomas Schweder and Stephanie Markert

    Standards in Genomic Sciences 2017 12:50

    Published on: 2 September 2017

  6. Extended genome report

    Draft genome sequences of two opportunistic pathogenic strains of Staphylococcus cohnii isolated from human patients

    Herein, we report the draft-genome sequences and annotation of two opportunistic pathogenic strains of Staphylococcus cohnii isolated from humans. One strain (SC-57) was isolated from blood from a male patient in...

    Soraya Mendoza-Olazarán, José F. Garcia-Mazcorro, Rayo Morfín-Otero, Licet Villarreal-Treviño, Adrián Camacho-Ortiz, Eduardo Rodríguez-Noriega, Paola Bocanegra-Ibarias, Héctor J. Maldonado-Garza, Scot E. Dowd and Elvira Garza-González

    Standards in Genomic Sciences 2017 12:49

    Published on: 31 August 2017

  7. Extended genome report

    The draft genome of the hyperthermophilic archaeon Pyrodictium delaneyi strain hulk, an iron and nitrate reducer, reveals the capacity for sulfate reduction

    Pyrodictium delaneyi strain Hulk is a newly sequenced strain isolated from chimney samples collected from the Hulk sulfide mound on the main Endeavour Segment of the Juan de Fuca Ridge (4...

    Lucas M. Demey, Caitlin R. Miller, Michael P Manzella, Rachel R. Spurbeck, Sukhinder K. Sandhu, Gemma Reguera and Kazem Kashefi

    Standards in Genomic Sciences 2017 12:47

    Published on: 15 August 2017

  8. Extended genome report

    High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460

    The genetic platforms of Deinococcus species remain the only systems in which massive ionizing radiation (IR)-induced genome damage can be investigated in vivo at exposures commensurate with cellular survival. We...

    Vera Y. Matrosova, Elena K. Gaidamakova, Kira S. Makarova, Olga Grichenko, Polina Klimenkova, Robert P. Volpe, Rok Tkavc, Gözen Ertem, Isabel H. Conze, Evelyne Brambilla, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova…

    Standards in Genomic Sciences 2017 12:46

    Published on: 28 July 2017

  9. Extended genome report

    The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1

    Xanthomonas citri pv. malvacearum is a major pathogen of cotton, Gossypium hirsutum L.. In this study we report the complete genome of the X. citri pv. malvacearum strain MSCT1 assembled ...

    Kurt C. Showmaker, Mark A. Arick II, Chuan-Yu Hsu, Brigitte E. Martin, Xiaoqiang Wang, Jiayuan Jia, Martin J. Wubben, Robert L. Nichols, Tom W. Allen, Daniel G. Peterson and Shi-En Lu

    Standards in Genomic Sciences 2017 12:42

    Published on: 24 July 2017

  10. Extended genome report

    Neisseria lactamica Y92–1009 complete genome sequence

    We present the high quality, complete genome assembly of Neisseria lactamica Y92–1009 used to manufacture an outer membrane vesicle (OMV)-based vaccine, and a member of the Neisseria genus. The strain is availabl...

    Anish K. Pandey, David W. Cleary, Jay R. Laver, Martin C. J. Maiden, Xavier Didelot, Andrew Gorringe and Robert C. Read

    Standards in Genomic Sciences 2017 12:41

    Published on: 24 July 2017

  11. Extended genome report

    First draft genome sequence of a strain from the genus Fusibacter isolated from Salar de Ascotán in Northern Chile

    Fusibacter sp. 3D3 (ATCC BAA-2418) is an arsenate-reducing halotolerant strain within the Firmicutes phylum, isolated from the Salar de Ascotán, a hypersaline salt flat in Northern Chile....

    Antonio E. Serrano, Lorena V. Escudero, Cinthya Tebes-Cayo, Mauricio Acosta, Olga Encalada, Sebastián Fernández-Moroso and Cecilia Demergasso

    Standards in Genomic Sciences 2017 12:43

    Published on: 24 July 2017

  12. Extended genome report

    Draft genome sequences of strains Salinicola socius SMB35T, Salinicola sp. MH3R3–1 and Chromohalobacter sp. SMB17 from the Verkhnekamsk potash mining region of Russia

    Halomonads are moderately halophilic bacteria that are studied as models of prokaryotic osmoadaptation and sources of enzymes and chemicals for biotechnological applications. Despite the progress in understand...

    Björn E. Olsson, Ekaterina S. Korsakova, Lyudmila N. Anan’ina, Anna A. Pyankova, Olga V. Mavrodi, Elena G. Plotnikova and Dmitri V. Mavrodi

    Standards in Genomic Sciences 2017 12:39

    Published on: 19 July 2017

  13. Short genome report

    High-quality draft genome sequence of a biofilm forming lignocellulolytic Aspergillus niger strain ATCC 10864

    Filamentous fungus Aspergillus niger has high industrial value due to their lignocellulolytic enzyme activities and ATCC 10864 is one of the few type strains of A. niger which has a unique biofilm forming capabil...

    Sujay Paul, Yvette Ludeña, Gretty K. Villena, Fengan Yu, David H. Sherman and Marcel Gutiérrez-Correa

    Standards in Genomic Sciences 2017 12:37

    Published on: 17 July 2017

  14. Short genome report

    Complete genome sequence of Leuconostoc suionicum DSM 20241T provides insights into its functional and metabolic features

    The genome of Leuconostoc suionicum DSM 20241T (=ATCC 9135T = LMG 8159T = NCIMB 6992T) was completely sequenced and its fermentative metabolic pathways were reconstructed to investigate the fermentative propertie...

    Byung Hee Chun, Se Hee Lee, Hye Hee Jeon, Dong-Woon Kim and Che Ok Jeon

    Standards in Genomic Sciences 2017 12:38

    Published on: 17 July 2017

  15. Short genome report

    Chromosomal features of Escherichia coli serotype O2:K2, an avian pathogenic E. coli

    Escherichia coli causing infection outside the gastrointestinal system are referred to as extra-intestinal pathogenic E. coli. Avian pathogenic E. coli is a subgroup of extra-intestinal p...

    Steffen L. Jørgensen, Egle Kudirkiene, Lili Li, Jens P. Christensen, John E. Olsen, Lisa Nolan and Rikke H. Olsen

    Standards in Genomic Sciences 2017 12:33

    Published on: 10 May 2017

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