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  1. Content type: Report

    Thiodictyon syntrophicum” sp. nov. strain Cad16T is a photoautotrophic purple sulfur bacterium belonging to the family of Chromatiaceae in the class of Gammaproteobacteria. The type strain Cad16T was isolated fr...

    Authors: Samuel M. Luedin, Joël F. Pothier, Francesco Danza, Nicola Storelli, Niels-Ulrik Frigaard, Matthias Wittwer and Mauro Tonolla

    Citation: Standards in Genomic Sciences 2018 13:14

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  2. Content type: Short genome report

    Bacterial surface colonization and biofilm formation often rely on the production of an extracellular polymeric matrix that mediates cell-cell and cell-surface contacts. In Escherichia coli and many Betaproteobac...

    Authors: Joaquin Bernal-Bayard, Laura Gomez-Valero, Aimee Wessel, Varun Khanna, Christiane Bouchier and Jean-Marc Ghigo

    Citation: Standards in Genomic Sciences 2018 13:13

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  3. Content type: Extended genome report

    Mycoplasma agassizii is one of the known causative agents of upper respiratory tract disease (URTD) in Mojave desert tortoises (Gopherus agassizii) and in gopher tortoises (Gopherus polyphemus). We sequenced the ...

    Authors: David Alvarez-Ponce, Chava L. Weitzman, Richard L. Tillett, Franziska C. Sandmeier and C. Richard Tracy

    Citation: Standards in Genomic Sciences 2018 13:12

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  4. Content type: Extended genome report

    A light pink coloured bacterial strain ERGS5:01 isolated from glacial stream water of Sikkim Himalaya was affiliated to Janthinobacterium lividum based on 16S rRNA gene sequence identity and phylogenetic clusteri...

    Authors: Rakshak Kumar, Vishal Acharya, Dharam Singh and Sanjay Kumar

    Citation: Standards in Genomic Sciences 2018 13:11

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  5. Content type: Extended genome report

    Here we present the genome of Methylovulum psychrotolerans strain HV10-M2, a methanotroph isolated from Hardangervidda national park (Norway). This strain represents the second of the two validly published specie...

    Authors: Alejandro Mateos-Rivera, Tajul Islam, Ian P. G. Marshall, Lars Schreiber and Lise Øvreås

    Citation: Standards in Genomic Sciences 2018 13:10

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  6. Content type: Extended genome report

    Planktotalea frisia SH6-1T Hahnke et al. (Int J Syst Evol Microbiol 62:1619–24, 2012) is a planktonic marine bacterium isolated during a phytoplankton bloom from the southern North Sea. It belongs to the Roseobac...

    Authors: Insa Bakenhus, Sonja Voget, Anja Poehlein, Thorsten Brinkhoff, Rolf Daniel and Meinhard Simon

    Citation: Standards in Genomic Sciences 2018 13:7

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  7. Content type: Short genome report

    Mycoplasma testudineum is one of the pathogens that can cause upper respiratory tract disease in desert tortoises, Gopherus agassizii. We sequenced the genome of M. testudineum BH29T (ATCC 700618T = MCCM 03231T),...

    Authors: Chava L. Weitzman, Richard L. Tillett, Franziska C. Sandmeier, C. Richard Tracy and David Alvarez-Ponce

    Citation: Standards in Genomic Sciences 2018 13:9

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  8. Content type: Extended genome report

    We report the properties of a draft genome sequence of the bacterium Fermentimonas caenicola strain SIT8 (= CSUR P1560). This strain, whose genome is described here, was isolated from the fecal flora of a healthy...

    Authors: Mamadou Beye, Sofiane Bakour, Sory Ibrahima Traore, Jaishriram Rathored, Noémie Labas, Didier Raoult and Pierre-Edouard Fournier

    Citation: Standards in Genomic Sciences 2018 13:8

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  9. Content type: Extended genome report

    This genome report describes the draft genome and physiological characteristics of Bosea sp. WAO (=DSM 102914), a novel strain of the genus Bosea in the family Bradyrhizobiaceae. Bosea sp. WAO was isolated from p...

    Authors: Alexandra B. Walczak, Nathan Yee and Lily Y. Young

    Citation: Standards in Genomic Sciences 2018 13:6

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  10. Content type: Meeting report

    The gut microbiome is increasingly recognized as integral to human health, and is emerging as a mediator of human physical and cognitive performance. This has led to the recognition that US Department of Defen...

    Authors: Steven Arcidiacono, Jason W. Soares, J. Philip Karl, Linda Chrisey, C. P. T. Blair C. R. Dancy, Michael Goodson, Fredrick Gregory, Rasha Hammamieh, Nancy Kelley Loughnane, Robert Kokoska, C. A. P. T. Mark Riddle, Keith Whitaker and Kenneth Racicot

    Citation: Standards in Genomic Sciences 2018 13:5

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  11. Content type: Correction

    After publication of the original article [1] it was identified that an incorrect version of the manuscript has been published. This was caused by a technical error which led to a discrepancy between the edito...

    Authors: Anish K. Pandey, David W. Cleary, Jay R. Laver, Martin C. J. Maiden, Xavier Didelot, Andrew Gorringe and Robert C. Read

    Citation: Standards in Genomic Sciences 2018 13:4

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    The original article was published in Standards in Genomic Sciences 2017 12:41

  12. Content type: Extended genome report

    In this study, following its isolation from contaminated soil, the genomic sequence of Pseudomonas alcaliphila strain...

    Authors: Jakub Ridl, Jachym Suman, Serena Fraraccio, Miluse Hradilova, Michal Strejcek, Tomas Cajthaml, Andrea Zubrova, Tomas Macek, Hynek Strnad and Ondrej Uhlik

    Citation: Standards in Genomic Sciences 2018 13:3

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  13. Content type: Short genome report

    Streptomyces hyaluromycini MB-PO13T (=NBRC 110483T = DSM 100105T) is type strain of the species, which produces a hyaluronidase inhibitor, hyaluromycin. Here, we report the draft genome sequence of this strain to...

    Authors: Enjuro Harunari, Hisayuki Komaki, Natsuko Ichikawa, Akira Hosoyama, Akane Kimura, Moriyuki Hamada and Yasuhiro Igarashi

    Citation: Standards in Genomic Sciences 2018 13:2

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  14. Content type: Extended genome report

    Mycobacterium simiae (Karassova V, Weissfeiler J, Kraszanay E, Acta Microbiol Acad Sci Hung 12:275-82, 1965) is a slow-growing nontuberculous Mycobacterium species found in environmental niches, and recently evid...

    Authors: José L. Steffani-Vallejo, Marion E. Brunck, Erika Y. Acosta-Cruz, Rafael Montiel and Francisco Barona-Gómez

    Citation: Standards in Genomic Sciences 2018 13:1

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  15. Content type: Short genome report

    Acuticoccus yangtzensis JL1095T is a proteobacterium from a genus belonging to the family Rhodobacteraceae; it was isolated from surface waters of the Yangtze Estuary, China. This strain displays...

    Authors: Lei Hou, Jia Sun, Xiabing Xie, Nianzhi Jiao and Yao Zhang

    Citation: Standards in Genomic Sciences 2017 12:91

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  16. Content type: Extended genome report

    Brucellosis is a commonly diagnosed zoonosis that causes infertility and abortion in cattle, it is acquired from handling of infected animals or consuming contaminated milk or milk products. In Colombia, it be...

    Authors: Mauricio Pacheco-Montealegre, Rocío E. Patiño, Ligia Torres, Sabrina Jiménez, José Luis Rodríguez and Alejandro Caro-Quintero

    Citation: Standards in Genomic Sciences 2017 12:89

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  17. Content type: Short genome report

    Croceicoccus marinus E4A9Twas isolated from deep-sea sediment collected from the East Pacific polymetallic nodule area. The strain is able to produce esterase, which is widely used in the...

    Authors: Yue-Hong Wu, Hong Cheng, Ying-Yi Huo, Lin Xu, Qian Liu, Chun-Sheng Wang and Xue-Wei Xu

    Citation: Standards in Genomic Sciences 2017 12:88

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  18. Content type: Extended genome report

    A bacterium belonging to the phylum Synergistetes, genus Dethiosulfovibrio was isolated in 2007 from a saline spring in Colombia. Dethiosulfovibrio salsuginis USBA 82T (DSM 21565 ...

    Authors: Carolina Díaz-Cárdenas, Gina López, José David Alzate-Ocampo, Laura N. González, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Silvia Restrepo and Sandra Baena

    Citation: Standards in Genomic Sciences 2017 12:86

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  19. Content type: Short genome report

    Bacteria of the genus Pectobacterium are economically important plant pathogens that cause soft rot disease on a wide variety of plant species. Here, we report the genome sequence of Pectobacterium carotovorum st...

    Authors: Outi Niemi, Pia Laine, Patrik Koskinen, Miia Pasanen, Ville Pennanen, Heidi Harjunpää, Johanna Nykyri, Liisa Holm, Lars Paulin, Petri Auvinen, E. Tapio Palva and Minna Pirhonen

    Citation: Standards in Genomic Sciences 2017 12:87

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  20. Content type: Meeting report

    Due to significant declines in the price of genome sequencing technology, the bioinformatics sciences are experiencing a massive upswing in data generation resulting in an increasing need for data distribution...

    Authors: Kathryn Petersen Mace, Daniel Jacobson, Brooklin Gore, Lauren Rotman, Jennifer Schopf, Mary Hester, Predrag Radulovic and William Barnett

    Citation: Standards in Genomic Sciences 2017 12:83

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  21. Content type: Extended genome report

    Acidithiobacillus thiooxidans CLST is an extremely acidophilic gamma-proteobacteria that was...

    Authors: Raquel Quatrini, Lorena V. Escudero, Ana Moya-Beltrán, Pedro A. Galleguillos, Francisco Issotta, Mauricio Acosta, Juan Pablo Cárdenas, Harold Nuñez, Karina Salinas, David S. Holmes and Cecilia Demergasso

    Citation: Standards in Genomic Sciences 2017 12:84

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  22. Content type: Short genome report

    A lytic bacteriophage RG-2014 infecting a biofilm forming multidrug resistant bacterium Delftia tsuruhatensis strain ARB-1 as its host was isolated from a full-scale municipal wastewater treatment plant. Lytic ph...

    Authors: Ananda Shankar Bhattacharjee, Amir Mohaghegh Motlagh, Eddie B. Gilcrease, Md Imdadul Islam, Sherwood R. Casjens and Ramesh Goel

    Citation: Standards in Genomic Sciences 2017 12:82

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