Table 3 Genome statistics
From: Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2
Attribute | Value | % of Total a,b |
|---|---|---|
Genome size (bp) | 5,801,355 | 100.00% |
DNA coding region (bp) | 5,144,694 | 88.68% |
DNA G + C content (bp) | 3,204,653 | 55.24% |
DNA scaffolds | 1 | Â |
Total genes | 5,495 | 100.00% |
Protein-coding genes | 5,296 | 96.38% |
RNA genes | 199 | 3.62% |
Pseudo genes | 64 | 1.16% |
Genes in internal clusters | NA | Â |
Genes with function prediction | 4,740 | 86.26% |
Genes assigned to COGs | 4,599 | 83.69% |
Genes assigned Pfam domains | 4,904 | 89.24% |
Genes with signal peptides | 582 | 10.59% |
Genes coding for transmembrane helices | 1,330 | 24.20% |
CRISPR repeats | NA | Â |