Table 4 Number of genes associated with general COG functional categories in the whole genome
Code | Value | %age | Description |
|---|---|---|---|
J | 169 | 3.5 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.0 | RNA processing and modification |
K | 276 | 5.8 | Transcription |
L | 190 | 4.0 | Replication, recombination and repair |
B | 4 | 0.1 | Chromatin structure and dynamics |
D | 32 | 0.7 | Cell cycle control, Cell division, chromosome partitioning |
V | 59 | 1.2 | Defense mechanisms |
T | 284 | 6.0 | Signal transduction mechanisms |
M | 218 | 4.6 | Cell wall/membrane biogenesis |
N | 100 | 2.1 | Cell motility |
U | 122 | 2.6 | Intracellular trafficking and secretion |
O | 170 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 292 | 6.1 | Energy production and conversion |
G | 126 | 2.6 | Carbohydrate transport and metabolism |
E | 295 | 6.2 | Amino acid transport and metabolism |
F | 72 | 1.5 | Nucleotide transport and metabolism |
H | 196 | 4.1 | Coenzyme transport and metabolism |
I | 177 | 3.7 | Lipid transport and metabolism |
P | 236 | 5.0 | Inorganic ion transport and metabolism |
Q | 118 | 2.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 456 | 9.6 | General function prediction only |
S | 337 | 7.1 | Function unknown |
- | 823 | 17.3 | Not in COGs |