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Table 1 Classification and general features of Delftia acidovorans Cs1-4 according to MIGS recommendation [20]

From: Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [26]

  

Phylum Proteobacteria

TAS [27]

  

Class Betaproteobacteria

TAS [28, 29]

  

Order Burkholderiales

TAS [30, 29]

  

Family Comamonadaceae

TAS [31]

  

Genus Delftia

TAS [32]

  

Species acidovorans

TAS [32]

 

Gram stain

Negative

TAS [2]

 

Cell shape

Rod

TAS [2]

 

Motility

Motile

TAS [2]

 

Sporulation

Nonsporulating

TAS [2]

 

Temperature range

Mesophilic

TAS [2]

 

Optimum temperature

30 °C

TAS [2]

 

pH range, optimum

5.5-7.5, 7.0

TAS [2]

 

Carbon source

Phenanthrene, pyruvate, vanillate, succinate, Formic acid, gluconic acid, malonic acid, hydroxybutyric acid, lactic acid, propionic acid

TAS [2]

MIGS-6

Habitat

Oil fields, sludge, freshwater, soil

TAS [2]

MIGS-6.3

Salinity

Fresh water only

TAS [2]

MIGS-22

Oxygen requirement

Aerobic

TAS [2]

MIGS-15

Biotic relationship

Free-living

TAS [2]

MIGS-14

Pathogenicity

None

TAS [2]

MIGS-4

Geographic location

Chippewa Falls, Wisconsin, USA

TAS [2]

MIGS-5

Sample collection

2003

TAS [2]

MIGS-4.1

Latitude

44.9369 °N

TAS [1]

MIGS-4.2

Longitude

91.3928 °W

TAS [1]

MIGS-4.4

Altitude

256 m

TAS [1]

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [33]