Table 4 Delftia acidovorans Cs1-4 genome statistics
From: Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,685,842 | 100 |
DNA coding (bp) | 5,998,883 | 89.73 |
DNA G + C content (bp) | 4,460,657 | 66.72 |
DNA scaffold | 1 | 1.00 |
Total genes | 6,028 | 100.00 |
Protein coding genes | 5,931 | 98.39 |
RNA genes | 97 | 16.1 |
Pseudo genes | 70 | 1.16 |
Genes in internal clusters | 857 | 14.22 |
Genes with function prediction | 4,425 | 73.41 |
Genes assigned to COGs | 4,845 | 80.37 |
Genes assigned to Pfam domains | 5,061 | 83.96 |
Genes with signal peptides | 2,505 | 41.56 |
Genes with transmembrane helices | 1,377 | 22.84 |
CRISPR repeats | 3 | NA |