Table 5 Number of genes in Delftia acidovorans Cs1-4 associated with the 25 general COG functional categories
From: Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4
Code | Value | % of totala | Description |
|---|---|---|---|
J | 207 | 3.78 | Translation |
A | 2 | 0.04 | RNA processing and modification |
K | 581 | 10.62 | Transcription |
L | 168 | 3.07 | Replication, recombination and repair |
B | 2 | 0.04 | Chromatin structure and dynamics |
D | 32 | 0.58 | Cell cycle control, mitosis and meiosis |
V | 71 | 1.3 | Defense mechanisms |
T | 362 | 6.62 | Signal transduction mechanisms |
M | 251 | 4.59 | Cell wall/membrane biogenesis |
N | 138 | 2.52 | Cell motility |
U | 145 | 2.65 | Intracellular trafficking and secretion |
O | 162 | 2.96 | Posttranslational modification, protein turnover, chaperones |
C | 346 | 6.32 | Energy production and conversion |
G | 242 | 4.42 | Carbohydrate transport and metabolism |
E | 479 | 8.76 | Amino acid transport and metabolism |
F | 88 | 1.61 | Nucleotide transport and metabolism |
H | 191 | 3.49 | Coenzyme transport and metabolism |
I | 261 | 4.77 | Lipid transport and metabolism |
P | 368 | 6.73 | Inorganic ion transport and metabolism |
Q | 172 | 3.14 | Secondary metabolites biosynthesis, transport and catabolism |
R | 621 | 11.35 | General function prediction only |
S | 580 | 10.60 | Function unknown |
- | 1183 | 19.63 | Not in COGs |