Table 3 Genomic statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,131,621 | 100.00 |
DNA coding (bp) | 3,538,864 | 85.65 |
DNA G + C (bp) | 2,682,192 | 64.92 |
DNA scaffolds | 20 | 100.00 |
Total genes | 4,342 | 100.00 |
Protein-coding genes | 4,215 | 97.08 |
RNA genes | 127 | 2.92 |
Genes in internal clusters | 3,412 | 78.58 |
Genes with function prediction | 2,636 | 60.71 |
Genes assigned to COGs | 2,144 | 49.38 |
Genes with Pfam domains | 2,638 | 60.76 |
Genes with signal peptides | 79 | 1.82 |
Genes with transmembrane helices | 984 | 22.66 |
CRISPR repeats | 1 |