Table 4 Number of genes associated with general COG functional categories

J

154

6.53

Translation, ribosomal structure, and biogenesis

A

1

0.04

RNA processing and modification

K

107

4.54

Transcription

L

129

5.47

Replication, recombination, and repair

B

3

0.13

Chromatin structure dynamics

D

19

0.81

Cell cycle control, mitosis, and meiosis

Y

0

0.00

Nuclear structure

V

31

1.31

Defense mechanisms

T

78

3.31

Signal transduction mechanisms

M

69

2.93

Cell wall/membrane biogenesis

N

17

0.72

Cell motility

Z

0

0.00

Cytoskeleton

W

0

0.00

Extracellular structures

U

21

0.89

Intracellular trafficking, secretion, and vesicular transport

O

101

4.28

Posttranslational modification, protein turnover, chaperones

C

167

7.08

Energy production conversion

G

88

3.73

Carbohydrate transport metabolism

E

217

9.20

Amino acid transport metabolism

F

66

2.80

Nucleotide transport metabolism

H

131

5.56

Coenzyme transport metabolism

I

125

5.30

Lipid transport metabolism

P

158

6.70

Inorganic ion transport metabolism

Q

50

2.12

Secondary metabolites biosynthesis, transport catabolism

R

400

16.96

General function prediction only

S

226

9.58

Function unknown

-

2198

50.62

Not in COGs