Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,086,721 | 100.00 |
DNA coding (bp) | 2,284,152 | 74.00 |
DNA G+C (bp) | 2,147,191 | 69.56 |
DNA scaffolds | 109 | |
Total genes | 2,422 | 100.00 |
Protein coding genes | 2,363 | 97.56 |
RNA genes | 50 | 2.06 |
Pseudo genes | 9 | 0.37 |
Genes in internal clusters | 811 | 34.32 |
Genes with function prediction | 1633 | 67.42 |
Genes assigned to COGs | 1858 | 76.71 |
Genes with Pfam domains | 2038 | 84.14 |
Genes with signal peptides | 539 | 22.81 |
Genes with transmembrane helices | 527 | 22.25 |
CRISPR repeats | 1 | 0.41 |