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Table 2 Project information

From: Complete genome sequence of Mycobacterium tuberculosis K from a Korean high school outbreak, belonging to the Beijing family

MIGS ID

Property

Term

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

Three genomic libraries: two Sanger libraries; 2 kb shotgun library, fosmid library, respectively and one Illumina library

MIGS-29

Sequencing platforms

Sanger, Illumina MiSeq 250 bp paired-end

MIGS-31.2

Fold coverage

8.3x (Sanger), 551.66x (Illumina)

MIGS-30

Assemblers

Phred/Phrap/Consed, CLC genomics workbench v6.5, CodonCode Aligner v3.7

MIGS-32

Gene calling method

Glimmer v 3.02

 

Locus Tag

MTBK

 

Genbank ID

CP007803.1

 

Genbank Date of Release

June 05, 2014

 

GOLD ID

Gp0032286

 

BIOPROJECT

PRJNA178919

MIGS-13

Source Material Identifier

The Korean Institution of Tuberculosis

Project relevance

Human-associated pathogen