Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 231 | 4.89 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 418 | 8.85 | Transcription |
L | 123 | 2.60 | Replication, recombination and repair |
B | 3 | 0.06 | Chromatin structure and dynamics |
D | 39 | 0.83 | Cell cycle control, Cell division, chromosome partitioning |
V | 101 | 2.14 | Defense mechanisms |
T | 316 | 6.69 | Signal transduction mechanisms |
M | 262 | 5.55 | Cell wall/membrane biogenesis |
N | 166 | 3.52 | Cell motility |
W | 44 | 0.93 | Extracellular structures |
U | 137 | 2.90 | Intracellular trafficking and secretion |
O | 166 | 3.52 | Posttranslational modification, protein turnover, chaperones |
C | 304 | 6.44 | Energy production and conversion |
G | 227 | 4.81 | Carbohydrate transport and metabolism |
E | 483 | 10.23 | Amino acid transport and metabolism |
F | 92 | 1.95 | Nucleotide transport and metabolism |
H | 242 | 5.12 | Coenzyme transport and metabolism |
I | 234 | 4.96 | Lipid transport and metabolism |
P | 257 | 5.44 | Inorganic ion transport and metabolism |
Q | 142 | 3.01 | Secondary metabolites biosynthesis, transport and catabolism |
R | 430 | 9.11 | General function prediction only |
S | 260 | 5.51 | Function unknown |
- | 1464 | 26.35 | Not in COGs |