Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,748,442 | 100.00 |
DNA coding (bp) | 2,272,995 | 82.70 |
DNA G + C (bp) | 1,218,718 | 44.34 |
DNA scaffolds | 26 | 100.00 |
Total genes | 2,526 | 100.00 |
Protein coding genes | 2,437 | 96.48 |
RNA genes | 89 | 3.52 |
Pseudo genes | 0 | 0.00 |
Genes in internal clusters | 1,553 | 61.48 |
Genes with function prediction | 2,051 | 81.20 |
Genes assigned to COGs | 1,800 | 71.26 |
Genes with Pfam domains | 2,103 | 83,25 |
Genes with signal peptides | 179 | 7.09 |
Genes with transmembrane helices | 552 | 21.85 |
CRISPR repeats | 1 |