Table 3 Genome statistics
From: The complete genome sequence of Eubacterium limosum SA11, a metabolically versatile rumen acetogen
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 4,150,332 | 100.00 |
DNA coding (bp) | 3,663,440 | 88.27 |
DNA G + C (bp) | 1,968,558 | 47.43 |
DNA scaffolds | 1 | 100.00 |
Total genes | 3902 | 100.00 |
Protein coding genes | 3805 | 97.51 |
RNA genes | 76 | 1.95 |
Pseudo genes | 21 | 0.54 |
Genes with function prediction | 2856 | 75.06 |
Genes assigned to COGs | 2545 | 66.89 |
Genes with Pfam domains | 3349 | 88.02 |
Genes with signal peptides | 242 | 6.36 |
Genes with transmembrane helices | 1011 | 26.57 |
CRISPR repeats | 2 | Â |