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Table 1 Classification and general features of T. cyclicum ALM1T in accordance with the MIGS recommendations [48] (published by the Genome Standards Consortium [49]) and the NamesforLife database [50]

From: Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477T)

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [51]

  

Phylum ‘Proteobacteria’

TAS [52]

  

Class Gammaproteobacteria

TAS [53, 54]

  

Order Thiotrichales

TAS [54, 55]

  

Family Piscirickettsiaceae

TAS [54, 56]

  

Genus Thioalkalimicrobium

TAS [2]

  

Species Thioalkalimicrobium cyclicum

TAS [1]

  

(Type) strain: ATMT (AF329082)

 
 

Gram stain

negative

TAS [1, 2]

 

Cell shape

open ring-shaped

TAS [1]

 

Motility

non-motile

TAS [1]

 

Sporulation

not reported

 
 

Temperature range

mesophile, about 28 °C

NAS

 

Optimum temperature

not reported

 
 

pH range; Optimum

not reported

 
 

Carbon source

CO2

NAS

MIGS-6

Habitat

water

TAS [1]

MIGS-6.3

Salinity

Moderate, 0.6 to 1.5 M NaCl

TAS [1]

MIGS-22

Oxygen requirement

aerobic

TAS [1]

MIGS-15

Biotic relationship

free-living

TAS [1]

MIGS-14

Pathogenicity

none

NAS

MIGS-4

Geographic location

Lake Mono (California)

TAS [1]

MIGS-5

Sample collection

1999

TAS [1]

MIGS-4.1

Latitude

38.012

TAS [1]

MIGS-4.2

Longitude

−118.976

TAS [1]

MIGS-4.4

Altitude

1926 m

TAS [1]

  1. aEvidence codes - IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [57]