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Table 3 Genome statistics

From: Draft genome sequence of Lampropedia cohaerens strain CT6T isolated from arsenic rich microbial mats of a Himalayan hot water spring

Attribute

Genome (total) Value

% of totala

Genome size (bp)

3,158,922

100.00

DNA coding (bp)

2,808,764

88.92

DNA G+C (bp)

2,004,739

63.46

DNA scaffolds

41

100.00

Total genes

2909

100.00

Protein coding genes

2823

97.04

RNA genes

86

2.96

Pseudo genes

0

0.00

Genes in internal clusters

302

10.38

Genes with function prediction

2439

83.84

Genes assigned to COGs

2713

92.09

Genes with Pfam domains

2539

87.28

Genes with signal pedtides

238

8.18

Genes with transmembrane helices

665

22.86

CRISPR repeats

3

100.00

  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes predicted in the annotated draft genome