Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 205 | 8.2 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 120 | 4.8 | Transcription |
L | 83 | 3.3 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 38 | 1.5 | Cell cycle control, Cell division, chromosome partitioning |
V | 61 | 2.4 | Defense mechanisms |
T | 156 | 6.2 | Signal transduction mechanisms |
M | 225 | 9.0 | Cell wall/membrane biogenesis |
N | 101 | 4.0 | Cell motility |
U | 56 | 2.2 | Intracellular trafficking and secretion |
O | 144 | 5.8 | Posttranslational modification, protein turnover, chaperones |
C | 207 | 8.3 | Energy production and conversion |
G | 86 | 3.4 | Carbohydrate transport and metabolism |
E | 153 | 6.1 | Amino acid transport and metabolism |
F | 63 | 2.5 | Nucleotide transport and metabolism |
H | 144 | 5.8 | Coenzyme transport and metabolism |
I | 76 | 3.0 | Lipid transport and metabolism |
P | 206 | 8.2 | Inorganic ion transport and metabolism |
Q | 37 | 1.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 165 | 6.6 | General function prediction only |
S | 143 | 5.7 | Function unknown |
- | 939 | 29.4 | Not in COGs |