Attribute | MB11 | MB14 | MB30 | MB66 | ||||
---|---|---|---|---|---|---|---|---|
Value | % of Total | Value | % of Total | Value | % of Total | Value | % of Total | |
Genome size (bp) | 2,363,423 | 100.0 | 2,370,761 | 100.0 | 2,364,377 | 100.0 | 2,372,202 | 100.0 |
DNA coding (bp) | 2,021,172 | 85.52 | 2,052,709 | 86.58 | 2,066,802 | 87.41 | 2,006,473 | 84.58 |
DNA G + C (bp) | 1,067,329 | 52.09 | 1,235,085 | 52.1 | 1,231,731 | 52.09 | 1,235,856 | 52.1 |
DNA scaffolds | 1 | 100.0 | 1 | 100.0 | 1 | 100.0 | 1 | 100.0 |
Total genes | 2,260 | 100.0 | 2,317 | 100.0 | 2,237 | 100.0 | 2,334 | 100.0 |
Protein coding genes | 2,179 | 96.41 | 2,235 | 96.46 | 2,225 | 99.46 | 2,201 | 94.30 |
RNA genes | 63 | 2.79 | 63 | 2.78 | 63 | 2.82 | 63 | 2.70 |
Pseudo genes | 37 | 1.64 | 20 | 0.86 | 6 | 0.27 | 54 | 2.31 |
Genes in internal clusters | 775 | 34.29 | 785 | 33.88 | 779 | 34.82 | 774 | 33.16 |
Genes with function prediction | 1,526 | 67.52 | 1,576 | 68.02 | 1,577 | 70.50 | 1,550 | 66.41 |
Genes assigned to COGs | 1,169 | 51.72 | 1,847 | 79.71 | 1,169 | 52.26 | 1,157 | 49.57 |
Genes with Pfam domains | 1,722 | 76.19 | 1,819 | 80.49 | 1,823 | 78.68 | 1,797 | 76.99 |
Genes with signal peptides | 88 | 3.89 | 92 | 3.97 | 93 | 4.16 | 86 | 3.68 |
Genes with transmembrane helices | 589 | 26.06 | 607 | 26.20 | 604 | 27.00 | 583 | 24.98 |
CRISPR repeats | 3 | 0.01 | 3 | 0.01 | 3 | 0.01 | 2 | 0.01 |