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Table 1 Classification and general features of Pedobacter steynii DX4

From: The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4

MIGS ID

Property

Term

Evidence code

 

Classification

Domain Bacteria

TAS [41]

  

Phylum Bacteroidetes

TAS [42, 43]

  

Class Sphingobacteriia

TAS [44,45,46]

  

Order Sphingobacteriales

TAS [44]

  

Family Sphingobacteriaceae

TAS [47, 48]

  

Genus Pedobacter

TAS [49]

  

Species Pedobacter steynii

TAS [49]

  

Strain DX4

 
 

Gram stain

Negative

TAS [49]

 

Cell shape

Rod

IDA

 

Motility

Motile

TAS [49]

 

Sporulation

Non-sporulating

TAS [49]

 

Temperature range

4-25 °C

IDA

 

Optimum temperature

20 °C

TAS [50]

 

pH range; Optimum

5-10; 7.5;

IDA

 

Carbon source

Yeast extract, pyruvate, crude oil

IDA

MIGS-6

Habitat

Frozen soil

IDA

MIGS-6.3

Salinity

0.5-4.5% NaCl (w/v)

TAS [51]

MIGS-22

Oxygen requirement

Aerobic

NAS

MIGS-15

Biotic relationship

Free-living

IDA

MIGS-14

Pathogenicity

Non-pathogen

NAS

MIGS-4

Geographic location

China: Tibetan Plateau, Dangxiong County

IDA

MIGS-5

Sample collection

2013

IDA

MIGS-4.1

Latitude

30.5633°N

NAS

MIGS-4.2

Longitude

91.4221°E

NAS

MIGS-4.4

Altitude

4488 m

NAS

  1. aEvidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable. Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project