Table 4 Number of genes associated with general COG functional categories
From: Complete genome of a novel virulent phage ST0 lysing Escherichia coli H8
Code | Value | %age | Description |
|---|---|---|---|
J | 2 | 0.74 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 7 | 2.60 | Transcription |
L | 15 | 5.58 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 2 | 0.74 | Cell cycle control, Cell division, chromosome partitioning |
V | 2 | 0.74 | Defense mechanisms |
T | 3 | 1.12 | Signal transduction mechanisms |
M | 5 | 1.86 | Cell wall/membrane biogenesis |
N | 0 | 0.00 | Cell motility |
U | 0 | 0.00 | Intracellular trafficking and secretion |
O | 6 | 2.23 | Posttranslational modification, protein turnover, chaperones |
C | 2 | 0.74 | Energy production and conversion |
G | 4 | 1.49 | Carbohydrate transport and metabolism |
E | 6 | 2.23 | Amino acid transport and metabolism |
F | 9 | 3.35 | Nucleotide transport and metabolism |
H | 2 | 0.74 | Coenzyme transport and metabolism |
I | 0 | 0.00 | Lipid transport and metabolism |
P | 2 | 0.74 | Inorganic ion transport and metabolism |
Q | 0 | 0.00 | Secondary metabolites biosynthesis, transport and catabolism |
R | 0 | 0.00 | General function prediction only |
S | 54 | 20.07 | Function unknown |
– | 148 | 55.02 | Not in COGs |