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Fig. 4 | Environmental Microbiome

Fig. 4

From: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

Fig. 4

Diversity and distribution of biosynthetic gene clusters (BGC) in the rhizosphere microbiome of the fox-resistant common bean cultivar inoculated and non-inoculated with Fusarium oxysporum. (A) Sequence similarity network [constructed with BiG-SCAPE (Navarro-Muñoz et al., 2019), threshold: 0.4] of the different classes of BGCs detected in the rhizosphere microbiome. Taxonomic assignment and BGC class annotation of the nodes are shown. Nodes with fewer than three connections were removed. Node colors represent statistical significance (FDR < 0.05): Yellow nodes are non significant, green and blue nodes are significantly overrepresented in bean plants inoculated and non-inoculated with F. oxysporum. (B) Clustered heat map of the differentially expressed BGCs among the different treatments. (C) Subset of the 9 BGCs that are significantly overexpressed in the resistant cultivar inoculated with the pathogen

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Environmental Microbiome

ISSN: 2524-6372