Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Tsukamurella paurometabola type strain (no. 33T)
Code | value | %age | Description |
|---|---|---|---|
J | 169 | 5.0 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 310 | 9.2 | Transcription |
L | 198 | 5.9 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 31 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 39 | 1.2 | Defense mechanisms |
T | 131 | 3.9 | Signal transduction mechanisms |
M | 135 | 4.0 | Cell wall/membrane/envelope biogenesis |
N | 3 | 0.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 29 | 0.9 | Intracellular trafficking, secretion, and vesicular transport |
O | 102 | 3.0 | Posttranslational modification, protein turnover, chaperones |
C | 217 | 6.4 | Energy production and conversion |
G | 220 | 6.5 | Carbohydrate transport and metabolism |
E | 274 | 8.1 | Amino acid transport and metabolism |
F | 85 | 2.5 | Nucleotide transport and metabolism |
H | 165 | 4.9 | Coenzyme transport and metabolism |
I | 231 | 6.8 | Lipid transport and metabolism |
P | 169 | 5.0 | Inorganic ion transport and metabolism |
Q | 172 | 5.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 430 | 12.7 | General function prediction only |
S | 269 | 8.0 | Function unknown |
- | 1,366 | 31.1 | Not in COGs |