Table 2. Genome sequencing project information
From: Complete genome sequence of Halogeometricum borinquense type strain (PR3T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Two genomic libraries: 8kb pMCL200 and fosmid pcc1Fos Sanger libraries. One 454 pyrosequence standard library. |
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 9.7× Sanger; 21.8× pyrosequencing |
MIGS-30 | Assemblers | Newbler, PGA |
MIGS-32 | Gene calling method | GeneMark 4.6b, tRNAScan-SE-1.23, infernal 0.81 |
INSDC / Genbank ID | CP001688 | |
Genbank Date of Release | September 10, 2009 | |
GOLD ID | Gc01108 | |
NCBI project ID | 20743 | |
Database: IMG-GEBA | 2501416934 | |
MIGS-13 | Source material identifier | DSM 11551 |
Project relevance | Tree of Life, GEBA |