From: Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2T)
Attribute | Value | % of Total |
---|---|---|
Genome size (bp) | 4,691,711 | 100.00% |
DNA coding region (bp) | 4,147,061 | 88.39% |
DNA G+C content (bp) | 2,573,778 | 54.87% |
Number of scaffolds | 4 | Â |
Number of contigs | 15 | Â |
Total genes | 4,594 | 100.00% |
RNA genes | 52 | 1.15% |
rRNA operons | 2 | Â |
Protein-coding genes | 4,542 | 98.85% |
Pseudo genes | 213 | 4.64% |
Genes with function prediction | 2,918 | 63.52% |
Genes in paralog clusters | 2,282 | 49.67% |
Genes assigned to COGs | 3,275 | 71.29% |
Genes assigned Pfam domains | 3,338 | 72.66% |
Genes with signal peptides | 971 | 21.14% |
Genes with transmembrane helices | 1,027 | 22.36% |
CRISPR repeats | 4 | Â |