Table 4. Number of genes associated with the 25 general COG functional categories
From: Non-contiguous finished genome sequence and description of Clostridium senegalense sp. nov.
Code | Value | % agea | Description |
|---|---|---|---|
J | 183 | 4.94 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 260 | 7.02 | Transcription |
L | 165 | 4.45 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 28 | 0.75 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 155 | 4.18 | Defense mechanisms |
T | 202 | 5.45 | Signal transduction mechanisms |
M | 134 | 3.62 | Cell wall/membrane biogenesis |
N | 70 | 1.88 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 37 | 0.99 | Intracellular trafficking and secretion |
O | 74 | 1.99 | Posttranslational modification, protein turnover, chaperones |
C | 170 | 4.59 | Energy production and conversion |
G | 102 | 2.75 | Carbohydrate transport and metabolism |
E | 226 | 6.10 | Amino acid transport and metabolism |
F | 79 | 2.13 | Nucleotide transport and metabolism |
H | 104 | 2.80 | Coenzyme transport and metabolism |
I | 64 | 1.73 | Lipid transport and metabolism |
P | 136 | 3.67 | Inorganic ion transport and metabolism |
Q | 61 | 1.65 | Secondary metabolites biosynthesis, transport and catabolism |
R | 426 | 11.50 | General function prediction only |
S | 232 | 6.26 | Function unknown |
- | 1,198 | 32.34 | Not in COGs |