Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 151 | 6.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 137 | 5.8 | Transcription |
L | 138 | 5.8 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 24 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 49 | 2.1 | Defense mechanisms |
T | 239 | 10.1 | Signal transduction mechanisms |
M | 149 | 6.3 | Cell wall/membrane/envelope biogenesis |
N | 93 | 3.9 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 1 | 0.0 | Extracellular structures |
U | 60 | 2.5 | Intracellular trafficking, secretion, and vesicular transport |
O | 100 | 4.2 | Posttranslational modification, protein turnover, chaperones |
C | 109 | 4.6 | Energy production and conversion |
G | 185 | 7.8 | Carbohydrate transport and metabolism |
E | 179 | 7.5 | Amino acid transport and metabolism |
F | 62 | 2.6 | Nucleotide transport and metabolism |
H | 68 | 2,9 | Coenzyme transport and metabolism |
I | 57 | 2.4 | Lipid transport and metabolism |
P | 103 | 4.3 | Inorganic ion transport and metabolism |
Q | 23 | 1.0 | Secondary metabolites biosynthesis, transport and catabolism |
R | 267 | 11.3 | General function prediction only |
S | 181 | 7.6 | Function unknown |
- | 721 | 25.1 | Not in COGs |