Table 3. Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,237,577 | 100 |
DNA coding region(bp) | 5,499,388 | 88.2 |
DNA G+C content (bp) | 3612173 | 57.9 |
DNA scaffolds | 1 | 100 |
Total genes | 4,960 | 100 |
Protein coding genes | 4,907 | 98.9 |
RNA genes | 53 | 1.3 |
Pseudo genes | 90 | 1.8 |
Genes in internal clusters | 2,679 | 54 |
Genes with function prediction | 3,511 | 70.8 |
Genes assigned to COGs | 3,496 | 70.5 |
Genes with Pfam domains | 3,754 | 75.7 |
Genes with signal peptides | 797 | 16.1 |
Genes with transmembrane helices | 1,291 | 26.0 |
CRISPR repeats | 0 | - |