Table 4. Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 167 | 4.32 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.05 | RNA processing and modification |
K | 332 | 8.58 | Transcription |
L | 156 | 4.03 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 27 | 0.7 | Cell cycle control, Cell division, chromosome partitioning |
Y | 0.0 | 0.0 | Nuclear structure |
V | 76 | 1.96 | Defense mechanisms |
T | 139 | 3.59 | Signal transduction mechanisms |
M | 322 | 8.32 | Cell wall/membrane biogenesis |
N | 17 | 0.44 | Cell motility |
Z | 0.0 | 0.0 | Cytoskeleton |
W | 0.0 | 0.0 | Extracellular structures |
U | 79 | 2.04 | Intracellular trafficking and secretion |
O | 123 | 3.18 | Posttranslational modification, protein turnover, chaperones |
C | 193 | 4.99 | Energy production and conversion |
G | 355 | 9.18 | Carbohydrate transport and metabolism |
E | 258 | 6.67 | Amino acid transport and metabolism |
F | 76 | 1.96 | Nucleotide transport and metabolism |
H | 155 | 4.01 | Coenzyme transport and metabolism |
I | 164 | 4.24 | Lipid transport and metabolism |
P | 157 | 4.06 | Inorganic ion transport and metabolism |
Q | 125 | 3.23 | Secondary metabolites biosynthesis, transport and catabolism |
R | 527 | 13.62 | General function prediction only |
S | 418 | 10.8 | Function unknown |
- | 1,464 | 29.52 | Not in COGs |