Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 167 | 5.7 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 192 | 6.6 | Transcription |
L | 145 | 5.0 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 30 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 56 | 1.9 | Defense mechanisms |
T | 129 | 4.4 | Signal transduction mechanisms |
M | 214 | 7.3 | Cell wall/membrane biogenesis |
N | 92 | 3.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 112 | 3.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 133 | 4.5 | Posttranslational modification, protein turnover, chaperones |
C | 186 | 6.4 | Energy production and conversion |
G | 170 | 5.8 | Carbohydrate transport and metabolism |
E | 209 | 7.1 | Amino acid transport and metabolism |
F | 68 | 2.3 | Nucleotide transport and metabolism |
H | 143 | 4.9 | Coenzyme transport and metabolism |
I | 101 | 3.5 | Lipid transport and metabolism |
P | 146 | 5.0 | Inorganic ion transport and metabolism |
Q | 63 | 2.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 323 | 11.0 | General function prediction only |
S | 246 | 8.4 | Function unknown |
- | 678 | 20.6 | Not in COGs |