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Table 4. Number of genes associated with the 25 general COG functional categories.

From: Non-contiguous finished genome sequence and description of Bartonella florenciae sp. nov.

Code

Value

%age

Description

J

141

7.43

Translation

A

0

0

RNA processing and modification

K

71

3.74

Transcription

L

98

5.17

Replication, recombination and repair

B

0

0

Chromatin structure and dynamics

D

25

1.32

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

19

1.00

Defense mechanisms

T

39

2.06

Signal transduction mechanisms

M

95

5.01

Cell wall/membrane biogenesis

N

9

0.47

Cell motility

Z

0

0

Cytoskeleton

W

7

0.37

Extracellular structures

U

85

4.48

Intracellular trafficking and secretion

O

74

3.90

Posttranslational modification, protein turnover and chaperones

C

77

4.06

Energy production and conversion

G

62

3.27

Carbohydrate transport and metabolism

E

129

6.80

Amino acid transport and metabolism

F

46

2.42

Nucleotide transport and metabolism

H

59

3.11

Coenzyme transport and metabolism

I

42

2.21

Lipid transport and metabolism

P

75

3.95

Inorganic ion transport and metabolism

Q

14

0.74

Secondary metabolites biosynthesis, transport and catabolism

R

189

9.96

General function prediction only

S

134

7.06

Function unknown

X

581

30.63

Not in COGs

  1. The total is based on the total number of protein coding genes in the annotated genome.