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Table 3. Genome statistics

From: Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon

Attribute

Value

% of totala

Genome size (bp)

4,153,658

 

DNA Coding region (bp)

3,323,928

80.02

DNA G+C content (bp)

2,335,216

56.22

No. of contigs

99

 

Total genesb

3,790

 

RNA genes

50

1.32

Protein-coding genes

3,740

98.68

Genes with functional prediction

2411

63.61

Genes with enzymes

775

20.45

Genes with transporter classification

343

9.05

Genes assigned to COGs

2,228

58.79

Genes assigned to Pfam

2,511

66.25

Genes assigned to TIGRFam

976

25.75

Genes assigned in paralog clusters

2427

64.04

Genes with signal peptides

137

3.61

Genes with transmembrane helices

810

21.37

  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.
  2. b) Also includes 283 pseudogenes.