Table 5. Number of protein coding genes of Rhizobium leguminosarum bv. trifolii SRDI565 associated with the general COG functional categories.
From: Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI565
Code | Value | %age | Description |
|---|---|---|---|
J | 191 | 3.22 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 574 | 9.67 | Transcription |
L | 189 | 3.19 | Replication, recombination and repair |
B | 3 | 0.05 | Chromatin structure and dynamics |
D | 41 | 0.69 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 70 | 1.18 | Defense mechanisms |
T | 320 | 5.39 | Signal transduction mechanisms |
M | 315 | 5.31 | Cell wall/membrane biogenesis |
N | 81 | 1.37 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 96 | 1.62 | Intracellular trafficking and secretion |
O | 208 | 3.51 | Posttranslational modification, protein turnover, chaperones |
C | 326 | 5.49 | Energy production conversion |
G | 633 | 10.67 | Carbohydrate transport and metabolism |
E | 591 | 9.96 | Amino acid transport metabolism |
F | 109 | 1.84 | Nucleotide transport and metabolism |
H | 193 | 3.25 | Coenzyme transport and metabolism |
I | 216 | 3.64 | Lipid transport and metabolism |
P | 272 | 4.58 | Inorganic ion transport and metabolism |
Q | 148 | 2.49 | Secondary metabolite biosynthesis, transport and catabolism |
R | 758 | 12.77 | General function prediction only |
S | 600 | 10.11 | Function unknown |
- | 1,506 | 22.03 | Not in COGS |