Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 151 | 6.37 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.04 | RNA processing and modification |
K | 152 | 6.42 | Transcription |
L | 136 | 5.74 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 20 | 0.84 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 32 | 1.35 | Defense mechanisms |
T | 58 | 2.45 | Signal transduction mechanisms |
M | 81 | 3.42 | Cell wall/membrane biogenesis |
N | 1 | 0.04 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 26 | 1.10 | Intracellular trafficking and secretion, and vesicular transport |
O | 72 | 3.04 | Posttranslational modification, protein turnover, chaperones |
C | 127 | 5.36 | Energy production and conversion |
G | 115 | 4.85 | Carbohydrate transport and metabolism |
E | 218 | 9.20 | Amino acid transport and metabolism |
F | 68 | 2.87 | Nucleotide transport and metabolism |
H | 97 | 4.09 | Coenzyme transport and metabolism |
I | 121 | 5.11 | Lipid transport and metabolism |
P | 151 | 6.37 | Inorganic ion transport and metabolism |
Q | 76 | 3.21 | Secondary metabolites biosynthesis, transport and catabolism |
R | 274 | 11.57 | General function prediction only |
S | 138 | 5.83 | Function unknown |
- | 557 | 23.51 | Not in COGs |