Table 4. Number of genes associated with the 25 general COG functional categories
Code | Value | %agea | Description |
|---|---|---|---|
J | 130 | 5.7 | Translation |
A | 0 | 0.0 | RNA processing and modification |
K | 64 | 2.8 | Transcription |
L | 89 | 3.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 16 | 0.7 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 27 | 1.2 | Defense mechanisms |
T | 163 | 7.1 | Signal transduction mechanisms |
M | 138 | 6.0 | Cell wall/membrane biogenesis |
N | 68 | 3.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 58 | 2.5 | Intracellular trafficking and secretion |
O | 69 | 3.0 | Posttranslational modification, protein turnover, chaperones |
C | 128 | 5.6 | Energy production and conversion |
G | 52 | 2.3 | Carbohydrate transport and metabolism |
E | 134 | 5.9 | Amino acid transport and metabolism |
F | 55 | 2.4 | Nucleotide transport and metabolism |
H | 97 | 4.2 | Coenzyme transport and metabolism |
I | 42 | 1.8 | Lipid transport and metabolism |
P | 101 | 4.4 | Inorganic ion transport and metabolism |
Q | 17 | 0.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 158 | 6.9 | General function prediction only |
S | 94 | 4.1 | Function unknown |
- | 590 | 25.8 | Not in COGs |